Below we provide simulated, in vitro and synthetic in vivo data. Detailed probe layouts can be obtained by clicking on each probe figure and we currently provide parameter files (.prb) for Klusta-Kwik as well as a simplified time-spike-file format (.tsf) which contains the channel layout.

Please contact us for help loading and formating the data for your particular spike sorting software.



Fully Biophysical - Rat S1
Mitelut C., Gratiy S., Anastassiou C. et al.
Allen Institute, Seattle in collaboration with the Neuroscience Gateway (NSG), UCSD, San Diego

Simulation Name Layout Data
silico_0

2-column
22um (x & y)
30 chs, 4 mins
silico_0.dat
silico_0.tsf
silico_1

1-column
22um (y)
15 chs, 4 mins
silico_1.dat
silico_1.tsf


Simulation Name Example Sorting Screen Data
june_28_3A

4-column (interleaved)
20um (y) and 16um (x)
60 chs, 5 mins
june_28_3A.bin
june_28_3A.tsf
june_28_3A_layout.txt
june_28_3B

2-column
20um (y) and 16um (x)
60 chs, 5 mins
june_28_3B.bin
june_28_3B.tsf
june_28_3B_layout.txt
june_28_3C

2-column
20um (y) and 48um (x)
60 chs, 5 mins
june_28_3C.bin
june_28_3C.tsf
june_28_3C_layout.txt


Simulation Name Example Sorting Screen Data
june_29_3A

4-column (interleaved)
20um (y) and 16um (x)
60 chs, 5 mins
june_29_3A.bin
june_29_3A.tsf
june_29_3A_layout.txt
june_29_3B

2-column
20um (y) and 16um (x)
60 chs, 5 mins
june_29_3B.bin
june_29_3B.tsf
june_29_3B_layout.txt
june_29_3C

2-column
20um (y) and 48um (x)
60 chs, 5 mins
june_29_3C.bin
june_29_3C.tsf
june_29_3C_layout.txt


Simulation Name Example Sorting Screen Data
july_1_3A

4-column (interleaved)
20um (y) and 16um (x)
60 chs, 5 mins
july_1_3A.bin
july_1_3A.tsf
july_1_3A_layout.txt
july_1_3B

2-column
20um (y) and 16um (x)
60 chs, 5 mins
july_1_3B.bin
july_1_3B.tsf
july_1_3B_layout.txt
july_1_3C

2-column
20um (y) and 48um (x)
60 chs, 5 mins
july_1_3C.bin
july_1_3C.tsf
july_1_3C_layout.txt


Simulation Name Example Sorting Screen Data
july_2_3A

4-column (interleaved)
20um (y) and 16um (x)
60 chs, 5 mins
july_2_3A.bin
july_2_3A.tsf
july_2_3A_layout.txt
july_2_3B

2-column
20um (y) and 16um (x)
60 chs, 5 mins
july_2_3B.bin
july_2_3B.tsf
july_2_3B_layout.txt
july_2_3C

2-column
20um (y) and 48um (x)
60 chs, 5 mins
july_2_3C.bin
july_2_3C.tsf
july_2_3C_layout.txt


Simulation Name Example Sorting Screen Data
july_23_3A - Independent Cell Drift Dataset (10 mins)

4-column (interleaved)
20um (y) and 16um (x)
60 chs, 10 mins
july_23_3A.bin
july_23_3A.tsf
july_23_3A_layout.txt
july_23_3B - Independent Cell Drift Dataset (10 mins)

2-column
20um (y) and 16um (x)
60 chs, 5 mins
july_23_3B.bin
july_23_3B.tsf
july_23_3B_layout.txt
july_23_3C - Independent Cell Drift Dataset (10 mins)

2-column
20um (y) and 48um (x)
60 chs, 5 mins
july_23_3C.bin
july_23_3C.tsf
july_23_3C_layout.txt




Hybrid Biophysical - Rat S1
Hagen E., Ness T., Einevoll G., et al. 2015 (ViSAPy)

Probe Layout Data
  • ViSAPy_0

  • 1-column
    20um (y)
    30 chs, 2 mins
    data link
    comming soon...



    Single Cell In Vivo - Cell Attached - Rat
    Neto, J., et al (Adam Kampff lab: http://www.kampff-lab.org/validating-electrodes/)

    Experiment Probe Layout Data Link
    2015_09_03_Cell9.0

    4-column
    20um (x & y)
    127 chs, 9.9 mins
    data link
    comming soon...